SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 32)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1008507	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10520689	0.89[EUR][1000 genomes]
rs11073928	0.84[EUR][1000 genomes]
rs11073929	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11629883	0.80[EUR][1000 genomes]
rs11636205	0.85[EUR][1000 genomes]
rs11638617	0.82[ASN][1000 genomes]
rs11852549	0.83[EUR][1000 genomes]
rs11852792	0.85[ASN][1000 genomes]
rs12161988	0.82[ASN][1000 genomes]
rs16944362	0.83[EUR][1000 genomes]
rs16944473	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16944485	0.80[EUR][1000 genomes]
rs2158407	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28455184	0.82[ASN][1000 genomes]
rs28630708	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28667854	0.83[EUR][1000 genomes]
rs28691618	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28702574	0.82[EUR][1000 genomes]
rs28782602	0.85[EUR][1000 genomes]
rs28863184	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4280212	0.82[ASN][1000 genomes]
rs4441248	0.82[ASN][1000 genomes]
rs58714003	0.82[ASN][1000 genomes]
rs62020738	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62021772	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62021773	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62021775	0.83[EUR][1000 genomes]
rs6496679	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs67409214	0.82[ASN][1000 genomes]
rs7169522	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8027565	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IQGAP1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)