SNP Report

Basic Infomation

Name	rs6119281 dbSNP
Location	chr:20,31346581
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 52)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1003521	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1007122	0.84[AMR][1000 genomes]
rs1007123	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1007124	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12329424	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1333469	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1569686	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1855349	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1855350	0.82[AMR][1000 genomes]
rs1883729	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1883730	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2018002	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2064350	0.82[AMR][1000 genomes]
rs2065576	0.81[AMR][1000 genomes]
rs2377667	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2424895	0.84[AMR][1000 genomes]
rs2424899	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2424903	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2424904	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2424905	0.90[AMR][1000 genomes]
rs2424907	0.84[AMR][1000 genomes]
rs2424909	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2424914	0.84[AMR][1000 genomes]
rs2424922	0.82[AMR][1000 genomes]
rs2424928	0.81[AMR][1000 genomes]
rs4911105	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4911106	0.87[AMR][1000 genomes]
rs4911107	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4911110	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4911252	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4911253	0.84[AMR][1000 genomes]
rs4911258	0.80[EUR][1000 genomes]
rs4911260	0.82[AMR][1000 genomes]
rs4911261	0.82[AMR][1000 genomes]
rs6057647	0.82[AMR][1000 genomes]
rs6058859	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6058860	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6058868	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6058869	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6058874	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6058875	0.82[EUR][1000 genomes]
rs6058883	0.83[AMR][1000 genomes]
rs6058891	0.82[AMR][1000 genomes]
rs6058893	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6087989	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6087990	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6087995	0.84[AMR][1000 genomes]
rs6087999	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6119279	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6141814	0.80[EUR][1000 genomes]
rs742630	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs910083	0.81[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
DNMT3B	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)