SNP Report

Basic Infomation

Name	rs6062328 dbSNP
Location	chr:20,62503273
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2236149	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2236150	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2236151	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2281535	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2281536	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3795149	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3795150	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3795151	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3795152	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4809373	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4809377	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4809378	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6011198	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6062327	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6062551	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6062552	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6062557	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6062559	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6062560	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6062561	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6062562	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6062563	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6062564	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6062565	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6062566	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6062567	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73151731	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73151741	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000270047	RNA binding protein mediated regulation
TPD52L2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)