SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11697286	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11697791	0.82[ASN][1000 genomes]
rs11698309	0.82[ASN][1000 genomes]
rs11699388	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1320999	0.89[ASN][1000 genomes]
rs2425764	0.89[ASN][1000 genomes]
rs4813009	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4813010	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4813011	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56678929	0.84[AFR][1000 genomes]
rs6032689	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs754317	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDH22	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)