SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10163480	0.86[EUR][1000 genomes]
rs10163489	0.86[EUR][1000 genomes]
rs10163490	0.86[EUR][1000 genomes]
rs11078579	0.86[EUR][1000 genomes]
rs12185249	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12953185	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1513839	0.86[EUR][1000 genomes]
rs1513840	0.86[EUR][1000 genomes]
rs1513841	0.86[EUR][1000 genomes]
rs2137726	0.86[EUR][1000 genomes]
rs2137727	0.85[EUR][1000 genomes]
rs2175828	0.86[EUR][1000 genomes]
rs2255534	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2670641	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2716912	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2733349	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2733379	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2733380	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2953436	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4790275	0.86[EUR][1000 genomes]
rs4790276	0.86[EUR][1000 genomes]
rs4790277	0.86[EUR][1000 genomes]
rs4790278	0.86[EUR][1000 genomes]
rs4790279	0.86[EUR][1000 genomes]
rs4790280	0.86[EUR][1000 genomes]
rs4790791	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4790792	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8182354	0.86[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
NLRP1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)