SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11820144	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4939481	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4939488	1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs4939493	0.80[MEX][hapmap]
rs59258857	0.91[ASN][1000 genomes]
rs61899222	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61899223	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7102626	0.93[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.89[TSI][hapmap];0.91[ASN][1000 genomes]
rs7929471	0.89[LWK][hapmap];0.88[MKK][hapmap]

rSNP related genes

Symbol	Regulation type
CD6	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 4)