SNP Report

Basic Infomation

Name	rs4656282 dbSNP
Location	chr:1,160900149
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10797088	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10797089	0.80[EUR][1000 genomes]
rs10908809	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11265510	0.82[EUR][1000 genomes]
rs11265529	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11585274	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11587040	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12080285	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12740520	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1855186	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1855187	0.82[EUR][1000 genomes]
rs2184064	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3953093	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4656281	0.82[EUR][1000 genomes]
rs4656959	0.83[EUR][1000 genomes]
rs4656960	0.82[EUR][1000 genomes]
rs4656961	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6427554	0.81[EUR][1000 genomes]
rs6427559	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6691868	0.82[EUR][1000 genomes]
rs6694415	0.81[EUR][1000 genomes]
rs6694743	0.81[AMR][1000 genomes]
rs6700408	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6703062	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6703704	0.82[EUR][1000 genomes]
rs6704490	0.81[EUR][1000 genomes]
rs7516660	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7551697	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000198358	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)