SNP Report
Name | rs4475253   dbSNP |
---|---|
Location | chr:5,131776506 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10059611 | 0.86[CEU][hapmap];0.95[CHB][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs12655512 | 0.87[CEU][hapmap];0.95[CHB][hapmap];0.91[EUR][1000 genomes] |
rs12659708 | 0.91[EUR][1000 genomes] |
rs2252405 | 0.86[CEU][hapmap];0.95[CHB][hapmap];0.91[EUR][1000 genomes] |
rs2522043 | 0.87[CEU][hapmap];0.95[CHB][hapmap];0.91[EUR][1000 genomes] |
rs2522044 | 0.87[CEU][hapmap];0.95[CHB][hapmap];0.91[EUR][1000 genomes] |
rs2522055 | 0.90[EUR][1000 genomes] |
rs2631370 | 0.81[CHB][hapmap] |
rs270605 | 0.81[CHB][hapmap] |
rs270613 | 0.90[CHB][hapmap] |
rs2706387 | 0.87[CEU][hapmap];0.95[CHB][hapmap];0.91[EUR][1000 genomes] |
rs272842 | 0.81[CHB][hapmap] |
rs272860 | 0.81[CHB][hapmap] |
rs272865 | 0.82[CHB][hapmap] |
rs272867 | 0.81[CHB][hapmap] |
rs272875 | 0.81[CHB][hapmap] |
rs272881 | 0.81[CHB][hapmap] |
rs272884 | 0.82[CHB][hapmap] |
rs272886 | 0.81[CHB][hapmap] |
rs272894 | 0.81[CHB][hapmap] |
rs273913 | 0.81[CHB][hapmap] |
rs273914 | 0.81[CHB][hapmap] |
rs274557 | 0.81[CHB][hapmap] |
rs274558 | 0.81[CHB][hapmap] |
rs274559 | 0.81[CHB][hapmap] |
rs4504381 | 0.91[CEU][hapmap];0.95[CHB][hapmap];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs4705933 | 0.82[CHB][hapmap] |
rs67202508 | 0.80[EUR][1000 genomes] |
rs6865438 | 0.91[EUR][1000 genomes] |
rs6866467 | 0.95[CHB][hapmap];0.87[EUR][1000 genomes] |
rs6868372 | 0.83[CEU][hapmap] |
rs726923 | 0.90[CEU][hapmap];0.90[CHB][hapmap];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7703230 | 0.90[CEU][hapmap];0.95[CHB][hapmap];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7713818 | 0.86[CEU][hapmap];0.95[CHB][hapmap];0.90[EUR][1000 genomes] |
rs7734052 | 0.82[EUR][1000 genomes] |
rs886285 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000238160 | Distal transcriptional regulation |
IRF1 | Distal transcriptional regulation |
SEPT8 | Distal transcriptional regulation |
IL3 | Distal transcriptional regulation |
IL4 | Distal transcriptional regulation |
C5orf56 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014