SNP Report

Basic Infomation

Name	rs422291 dbSNP
Location	chr:5,131320942
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs173811	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs173812	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs253941	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs253943	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs253948	0.85[AMR][1000 genomes]
rs253949	0.80[AMR][1000 genomes]
rs28537859	0.81[AMR][1000 genomes]
rs30159	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs30160	0.91[ASN][1000 genomes]
rs380182	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs399714	0.92[ASN][1000 genomes]
rs40819	0.91[ASN][1000 genomes]
rs413185	0.92[ASN][1000 genomes]
rs417585	0.81[AMR][1000 genomes]
rs4493667	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs476428	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs490054	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs491624	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs493829	0.90[ASN][1000 genomes]
rs510434	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs559971	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs600661	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60847707	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs615305	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs635164	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs652839	0.82[EUR][1000 genomes]
rs676944	0.89[ASN][1000 genomes]
rs683749	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs687816	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs71970	0.83[AMR][1000 genomes]
rs72793242	0.81[EUR][1000 genomes]
rs7708140	0.82[EUR][1000 genomes]
rs804059	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ACSL6	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)