SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12652141	0.91[EUR][1000 genomes]
rs12659233	0.88[EUR][1000 genomes]
rs13152879	0.88[EUR][1000 genomes]
rs13152885	0.91[EUR][1000 genomes]
rs13166346	0.88[EUR][1000 genomes]
rs17165928	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17715199	0.88[EUR][1000 genomes]
rs272873	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs272890	0.92[ASN][1000 genomes]
rs34376246	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35180332	0.88[EUR][1000 genomes]
rs35792621	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3761660	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3792892	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3815065	0.91[EUR][1000 genomes]
rs3828671	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4705859	0.83[EUR][1000 genomes]
rs4705861	0.91[EUR][1000 genomes]
rs4705942	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4705944	0.88[EUR][1000 genomes]
rs4705945	0.88[EUR][1000 genomes]
rs55864055	0.88[EUR][1000 genomes]
rs55942909	0.81[EUR][1000 genomes]
rs56394135	0.88[EUR][1000 genomes]
rs757103	0.88[EUR][1000 genomes]
rs9800384	0.85[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000233006	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)