SNP Report
Name | rs3812555   dbSNP |
---|---|
Location | chr:9,139261933 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10448340 | 0.82[CHB][hapmap];0.92[JPT][hapmap] |
rs10747044 | 0.82[CHB][hapmap];0.92[JPT][hapmap] |
rs10870166 | 0.82[CHB][hapmap];0.92[JPT][hapmap] |
rs11145919 | 0.88[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap] |
rs11145930 | 0.82[CHB][hapmap];0.92[JPT][hapmap] |
rs1130635 | 0.82[CHB][hapmap];0.92[JPT][hapmap] |
rs3812561 | 0.80[MKK][hapmap] |
rs3812578 | 0.81[CEU][hapmap] |
rs3812581 | 0.82[CHB][hapmap];0.92[JPT][hapmap] |
rs4075078 | 0.81[EUR][1000 genomes] |
rs4298601 | 0.82[CHB][hapmap];0.92[JPT][hapmap] |
rs563 | 0.81[CEU][hapmap] |
Symbol | Regulation type |
---|---|
DNLZ | Proximal transcriptional regulation |
SDCCAG3 | Distal transcriptional regulation |
PMPCA | Distal transcriptional regulation |
CARD9 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014