SNP Report

Basic Infomation

Name	rs3784106 dbSNP
Location	chr:14,68780897
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 51)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10083393	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10131654	1.00[CEU][hapmap];0.90[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10135678	0.97[EUR][1000 genomes]
rs10136039	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10144669	0.95[CEU][hapmap];0.90[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10483807	0.97[GIH][hapmap]
rs11158728	0.88[GIH][hapmap]
rs11158730	0.97[GIH][hapmap]
rs11621881	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11627646	0.88[GIH][hapmap]
rs12880109	0.95[GIH][hapmap]
rs12889206	0.82[LWK][hapmap]
rs12890124	0.88[GIH][hapmap]
rs12892777	0.97[GIH][hapmap]
rs1956523	1.00[CEU][hapmap];0.91[JPT][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1956525	0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs1956526	0.84[CHD][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs1956528	0.88[GIH][hapmap]
rs1956529	0.88[GIH][hapmap]
rs1956532	0.88[GIH][hapmap]
rs2013413	0.97[GIH][hapmap]
rs2064912	0.87[GIH][hapmap]
rs2064914	0.98[EUR][1000 genomes]
rs2145423	0.88[GIH][hapmap]
rs3784104	0.88[GIH][hapmap]
rs3784108	0.88[GIH][hapmap]
rs3784110	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs3784111	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs4410007	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4899238	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4902566	1.00[CEU][hapmap];0.88[GIH][hapmap];0.90[TSI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62635808	0.98[ASN][1000 genomes]
rs7144422	0.99[ASN][1000 genomes]
rs7146110	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs7147852	0.88[GIH][hapmap]
rs7148322	0.95[CEU][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7148412	1.00[CEU][hapmap];0.83[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7149396	0.86[CHD][hapmap];0.92[GIH][hapmap];0.90[JPT][hapmap];0.92[TSI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7150988	0.88[GIH][hapmap]
rs7151629	1.00[CEU][hapmap];0.97[GIH][hapmap];0.97[TSI][hapmap];0.96[EUR][1000 genomes]
rs7493547	1.00[CEU][hapmap];0.91[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8013078	1.00[CEU][hapmap];0.83[CHB][hapmap];0.91[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8013968	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8017304	0.88[GIH][hapmap]
rs8022860	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs911254	0.97[GIH][hapmap]
rs911255	1.00[CEU][hapmap];0.91[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs911258	1.00[CEU][hapmap];0.90[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs927220	0.95[CEU][hapmap];0.88[GIH][hapmap];0.90[TSI][hapmap];0.96[EUR][1000 genomes]
rs9323506	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9989152	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)