SNP Report
Basic Infomation
| Name | rs10136039 dbSNP |
|---|---|
| Location | chr:14,68769710 |
| Allele | A/C |
LD-proxy of rSNPs(r2>0.8) (count: 27)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10083393 | 0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs10131654 | 0.95[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs10135678 | 0.84[AFR][1000 genomes];0.97[EUR][1000 genomes] |
| rs10144669 | 0.92[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs11621881 | 0.92[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs1956523 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs2064914 | 0.94[EUR][1000 genomes] |
| rs2145422 | 0.92[ASN][1000 genomes] |
| rs2145423 | 0.92[ASN][1000 genomes] |
| rs3784106 | 0.92[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs4410007 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs4899238 | 0.96[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs4902566 | 0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs7147852 | 0.92[ASN][1000 genomes] |
| rs7148322 | 0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs7148412 | 0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs7149396 | 0.92[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs7151629 | 0.83[AFR][1000 genomes];0.96[EUR][1000 genomes] |
| rs7493547 | 0.92[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs8013078 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs8013968 | 0.92[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs8022860 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs911255 | 0.92[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs911258 | 0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs927220 | 0.82[AFR][1000 genomes];0.96[EUR][1000 genomes] |
| rs9323506 | 0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs9989152 | 0.92[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZFP36L1 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014