SNP Report
Basic Infomation
| Name | rs7144422 dbSNP |
|---|---|
| Location | chr:14,68799029 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 24)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10131654 | 0.86[ASN][1000 genomes] |
| rs10144669 | 0.86[ASN][1000 genomes] |
| rs11621881 | 0.84[ASN][1000 genomes] |
| rs1956523 | 0.86[ASN][1000 genomes] |
| rs1956525 | 0.86[ASN][1000 genomes] |
| rs1956526 | 0.86[ASN][1000 genomes] |
| rs28456296 | 0.96[EUR][1000 genomes] |
| rs3784106 | 0.99[ASN][1000 genomes] |
| rs3784110 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs3784111 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs4410007 | 0.86[ASN][1000 genomes] |
| rs4899234 | 0.84[EUR][1000 genomes] |
| rs4899238 | 0.87[ASN][1000 genomes] |
| rs62635808 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs7146110 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs7148412 | 0.86[ASN][1000 genomes] |
| rs7149396 | 0.86[ASN][1000 genomes] |
| rs7493547 | 0.86[ASN][1000 genomes] |
| rs8013078 | 0.87[ASN][1000 genomes] |
| rs8013968 | 0.85[ASN][1000 genomes] |
| rs8022860 | 0.87[ASN][1000 genomes] |
| rs911255 | 0.86[ASN][1000 genomes] |
| rs911258 | 0.84[ASN][1000 genomes] |
| rs9989152 | 0.99[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000240210 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014