SNP Report

Basic Infomation

Name	rs35836713 dbSNP
Location	chr:1,114173758
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 65)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10127930	0.89[EUR][1000 genomes]
rs10489936	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1080307	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1217384	0.82[EUR][1000 genomes]
rs12723023	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12729708	0.82[EUR][1000 genomes]
rs12730675	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12730735	0.87[EUR][1000 genomes]
rs12731010	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12731969	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12734625	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12735104	0.88[EUR][1000 genomes]
rs12739970	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12748727	0.88[EUR][1000 genomes]
rs12752932	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12753075	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12753351	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12758546	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12760457	0.88[EUR][1000 genomes]
rs13374352	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17274550	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17274620	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17274634	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17359302	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17462614	0.87[EUR][1000 genomes]
rs17508163	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17508814	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17509390	0.88[EUR][1000 genomes]
rs1885454	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2040040	0.89[EUR][1000 genomes]
rs2359173	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2359174	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34042871	0.89[EUR][1000 genomes]
rs34258372	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34341173	0.89[EUR][1000 genomes]
rs34649199	0.89[EUR][1000 genomes]
rs34799402	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34857922	0.82[EUR][1000 genomes]
rs34877889	0.87[EUR][1000 genomes]
rs35320278	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36115604	0.88[EUR][1000 genomes]
rs3747998	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3748003	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3761931	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3789595	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3789607	0.88[EUR][1000 genomes]
rs3789609	0.87[EUR][1000 genomes]
rs4581284	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs55855422	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs56257513	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61817586	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61817617	0.89[EUR][1000 genomes]
rs61819423	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61819424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61820162	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6668829	0.89[EUR][1000 genomes]
rs6674848	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs66782936	0.89[ASN][1000 genomes]
rs6703387	0.88[EUR][1000 genomes]
rs71662837	0.82[AMR][1000 genomes]
rs7533391	0.82[EUR][1000 genomes]
rs7533605	0.88[EUR][1000 genomes]
rs7549685	0.86[EUR][1000 genomes]
rs7555354	0.88[EUR][1000 genomes]
rs9803891	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MAGI3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)