SNP Report

Basic Infomation

Name	rs17508163 dbSNP
Location	chr:1,114077939
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10489936	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1080307	0.82[ASN][1000 genomes]
rs12723023	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12730675	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12731010	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12731969	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12739970	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12753075	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12753351	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12758546	0.82[ASN][1000 genomes]
rs17274550	0.80[ASN][1000 genomes]
rs17274620	0.82[ASN][1000 genomes]
rs17274634	0.82[ASN][1000 genomes]
rs17359302	0.82[ASN][1000 genomes]
rs17508814	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1885454	0.80[ASN][1000 genomes]
rs2359173	0.84[ASN][1000 genomes]
rs2359174	0.84[ASN][1000 genomes]
rs34258372	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34799402	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35320278	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs35836713	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3747998	0.82[ASN][1000 genomes]
rs3748003	0.84[ASN][1000 genomes]
rs3761931	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3789595	0.82[ASN][1000 genomes]
rs4581284	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55855422	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56257513	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61819423	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61819424	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs66782936	0.98[ASN][1000 genomes]
rs9803891	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MAGI3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)