SNP Report
Name | rs12753075   dbSNP |
---|---|
Location | chr:1,114127526 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10127930 | 0.85[EUR][1000 genomes] |
rs10489936 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs1080307 | 0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12723023 | 0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12730675 | 0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs12730735 | 0.82[EUR][1000 genomes] |
rs12731010 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12731969 | 0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12734625 | 0.82[EUR][1000 genomes] |
rs12735104 | 0.84[EUR][1000 genomes] |
rs12739970 | 0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12748727 | 0.84[EUR][1000 genomes] |
rs12752932 | 0.82[EUR][1000 genomes] |
rs12753351 | 0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12758546 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12760457 | 0.84[EUR][1000 genomes] |
rs13374352 | 0.81[EUR][1000 genomes] |
rs17274550 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs17274620 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs17274634 | 0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs17359302 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs17462614 | 0.82[EUR][1000 genomes] |
rs17508163 | 0.86[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs17508814 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs17509390 | 0.84[EUR][1000 genomes] |
rs1885454 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2040040 | 0.85[EUR][1000 genomes] |
rs2359173 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2359174 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs34042871 | 0.85[EUR][1000 genomes] |
rs34258372 | 0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs34341173 | 0.84[EUR][1000 genomes] |
rs34649199 | 0.85[EUR][1000 genomes] |
rs34799402 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs34877889 | 0.82[EUR][1000 genomes] |
rs35320278 | 0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs35836713 | 0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs36115604 | 0.84[EUR][1000 genomes] |
rs3747998 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs3748003 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs3761931 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs3789595 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs3789607 | 0.84[EUR][1000 genomes] |
rs3789609 | 0.82[EUR][1000 genomes] |
rs4581284 | 0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs55855422 | 0.86[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs55912359 | 0.81[AFR][1000 genomes] |
rs56257513 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs61817586 | 0.84[EUR][1000 genomes] |
rs61817617 | 0.85[EUR][1000 genomes] |
rs61819423 | 0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61819424 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs61820162 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs6668829 | 0.85[EUR][1000 genomes] |
rs6669008 | 0.81[AFR][1000 genomes] |
rs6674848 | 0.82[EUR][1000 genomes] |
rs66782936 | 0.93[ASN][1000 genomes] |
rs6703387 | 0.84[EUR][1000 genomes] |
rs7533605 | 0.84[EUR][1000 genomes] |
rs7549685 | 0.82[EUR][1000 genomes] |
rs7555354 | 0.84[EUR][1000 genomes] |
rs9803891 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
MAGI3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014