SNP Report
Name | rs6669008   dbSNP |
---|---|
Location | chr:1,114166561 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10858011 | 0.82[CHD][hapmap] |
rs1113523 | 0.82[CHD][hapmap] |
rs1146182 | 0.82[CHD][hapmap] |
rs1146187 | 0.85[CHD][hapmap] |
rs1217192 | 0.82[CHD][hapmap] |
rs1217200 | 0.85[CHD][hapmap] |
rs1217201 | 0.82[CHD][hapmap] |
rs1217226 | 0.82[CHD][hapmap] |
rs1217227 | 0.82[CHD][hapmap] |
rs1217228 | 0.82[CHD][hapmap] |
rs1217234 | 0.82[CHD][hapmap] |
rs1217236 | 0.80[CHD][hapmap] |
rs1230658 | 0.85[CHD][hapmap] |
rs1230659 | 0.84[CHD][hapmap] |
rs12565589 | 0.85[CHD][hapmap] |
rs12723023 | 0.83[AFR][1000 genomes] |
rs12739970 | 0.83[AFR][1000 genomes] |
rs12753075 | 0.81[AFR][1000 genomes] |
rs1743605 | 0.85[CHD][hapmap] |
rs1777237 | 0.85[CHD][hapmap] |
rs1777241 | 0.84[CHD][hapmap] |
rs1891969 | 0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4839331 | 1.00[YRI][hapmap];0.80[AFR][1000 genomes] |
rs55912359 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6704054 | 0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs7514649 | 1.00[YRI][hapmap] |
rs7517631 | 1.00[YRI][hapmap] |
Symbol | Regulation type |
---|---|
MAGI3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014