SNP Report
Name | rs17508814   dbSNP |
---|---|
Location | chr:1,114106769 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10489936 | 0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1080307 | 0.89[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs12723023 | 0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12730675 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12731010 | 0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12731969 | 1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12734625 | 0.84[AMR][1000 genomes] |
rs12739970 | 0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12752932 | 0.82[AMR][1000 genomes] |
rs12753075 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs12753351 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs12758546 | 0.89[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs13374352 | 0.84[AMR][1000 genomes] |
rs17274550 | 0.89[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs17274620 | 0.89[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs17274634 | 0.82[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs17359302 | 0.89[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs17508163 | 0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs1885454 | 0.89[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs2359173 | 0.89[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs2359174 | 0.89[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs34258372 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs34799402 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs35320278 | 0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs35836713 | 0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs3747998 | 0.89[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs3748003 | 0.89[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs3761931 | 0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs3789595 | 0.88[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs4581284 | 0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55855422 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs56257513 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61817586 | 0.84[AMR][1000 genomes] |
rs61819423 | 0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs61819424 | 0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs61820162 | 0.88[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs6674848 | 0.84[AMR][1000 genomes] |
rs66782936 | 1.00[ASN][1000 genomes] |
rs9803891 | 0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
MAGI3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014