SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10521	0.83[ASN][1000 genomes]
rs11145764	0.81[ASN][1000 genomes]
rs3124594	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3124596	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3124597	0.85[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3124598	0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs3125000	0.85[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3812603	0.85[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3812604	0.82[ASN][1000 genomes]
rs3812605	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3829116	0.82[ASN][1000 genomes]
rs4880054	0.95[ASN][1000 genomes]
rs4880098	0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
C9orf163	Distal transcriptional regulation
NOTCH1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)