SNP Report
Name | rs3019626   dbSNP |
---|---|
Location | chr:11,61808272 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10792324 | 0.84[CEU][hapmap] |
rs11230879 | 0.83[EUR][1000 genomes] |
rs12798399 | 0.91[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs2089925 | 0.84[CEU][hapmap];0.82[TSI][hapmap] |
rs259880 | 0.82[JPT][hapmap];0.80[ASN][1000 genomes] |
rs3019618 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs3019621 | 0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs3019623 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs427354 | 0.92[ASN][1000 genomes] |
rs6591687 | 0.89[CEU][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes] |
rs7120404 | 0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7122033 | 0.81[EUR][1000 genomes] |
rs7950734 | 0.84[CEU][hapmap] |
rs7951553 | 0.85[EUR][1000 genomes] |
rs7951604 | 0.89[CEU][hapmap];0.80[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
FTH1 | Distal transcriptional regulation |
ENSG00000269089 | Distal transcriptional regulation |
BEST1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014