SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs293537	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs293539	0.81[EUR][1000 genomes]
rs293540	0.90[EUR][1000 genomes]
rs293541	0.90[EUR][1000 genomes]
rs293548	0.82[EUR][1000 genomes]
rs293552	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs293555	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs293556	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs293560	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs756001	0.81[EUR][1000 genomes]
rs875519	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
C20orf112	Distal transcriptional regulation
C20orf112	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)