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rVarBase
SNP Report
Basic Infomation
Name
rs28720282  
dbSNP
Location
chr:11,61090956
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10750955
1.00[ASN][1000 genomes]
rs11230692
0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2924446
1.00[ASN][1000 genomes]
rs2924447
1.00[ASN][1000 genomes]
rs2957859
1.00[ASN][1000 genomes]
rs2957860
1.00[ASN][1000 genomes]
rs3018734
1.00[ASN][1000 genomes]
rs35723406
1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4274208
0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4939513
0.81[EUR][1000 genomes]
rs4939521
1.00[ASN][1000 genomes]
rs61742921
1.00[ASN][1000 genomes]
rs7107543
1.00[ASN][1000 genomes]
rs72929133
1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
DDB1
Proximal transcriptional regulation
DDB1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)