SNP Report

Basic Infomation

Name	rs2743330 dbSNP
Location	chr:20,43919704
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs16989837	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs16989887	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs2071650	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs2071651	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2206887	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs2206888	0.95[ASN][1000 genomes]
rs2206889	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2233879	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs2233903	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs2743334	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2743371	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35343177	0.93[ASN][1000 genomes]
rs35665166	0.95[ASN][1000 genomes]
rs3761192	0.92[ASN][1000 genomes]
rs3761193	0.95[ASN][1000 genomes]
rs3761194	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs41463948	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs4359712	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs4525753	0.95[ASN][1000 genomes]
rs57047308	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6017527	0.95[ASN][1000 genomes]
rs6032073	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs6032075	0.95[ASN][1000 genomes]
rs6032076	0.95[ASN][1000 genomes]
rs6032087	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6094110	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs6094123	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs6104065	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs6104069	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs6104085	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62205502	0.95[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
WFDC2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)