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rVarBase
SNP Report
Basic Infomation
Name
rs2731075  
dbSNP
Location
chr:12,48899570
Allele
T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10875832
0.85[EUR][1000 genomes]
rs11168572
0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2468348
0.81[ASN][1000 genomes]
rs2705157
0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2705165
0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2731066
0.82[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2731072
0.92[EUR][1000 genomes]
rs2731074
0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
OR8S1
Proximal transcriptional regulation
ENSG00000258121
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)