SNP Report
Basic Infomation
| Name | rs2468348 dbSNP |
|---|---|
| Location | chr:12,48895137 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 33)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11168573 | 0.80[ASN][1000 genomes] |
| rs11168584 | 0.80[ASN][1000 genomes] |
| rs11168601 | 0.84[ASN][1000 genomes] |
| rs11608260 | 0.84[ASN][1000 genomes] |
| rs11612896 | 0.80[ASN][1000 genomes] |
| rs11829869 | 0.84[ASN][1000 genomes] |
| rs11832311 | 0.84[ASN][1000 genomes] |
| rs17123105 | 0.84[ASN][1000 genomes] |
| rs17123106 | 0.84[ASN][1000 genomes] |
| rs17123108 | 0.84[ASN][1000 genomes] |
| rs2068293 | 0.84[ASN][1000 genomes] |
| rs2705133 | 0.86[AFR][1000 genomes] |
| rs2705165 | 0.80[AFR][1000 genomes];0.81[ASN][1000 genomes] |
| rs2731066 | 0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs2731074 | 0.80[AFR][1000 genomes];0.81[ASN][1000 genomes] |
| rs2731075 | 0.81[ASN][1000 genomes] |
| rs4237857 | 0.84[ASN][1000 genomes] |
| rs4265629 | 0.84[ASN][1000 genomes] |
| rs4344535 | 0.84[ASN][1000 genomes] |
| rs4351855 | 0.84[ASN][1000 genomes] |
| rs4500527 | 0.84[ASN][1000 genomes] |
| rs4550263 | 0.83[ASN][1000 genomes] |
| rs4551813 | 0.84[ASN][1000 genomes] |
| rs4620769 | 0.84[ASN][1000 genomes] |
| rs4760709 | 0.84[ASN][1000 genomes] |
| rs4760712 | 0.84[ASN][1000 genomes] |
| rs56796388 | 0.80[ASN][1000 genomes] |
| rs72644865 | 0.82[ASN][1000 genomes] |
| rs72644868 | 0.84[ASN][1000 genomes] |
| rs7488935 | 0.84[ASN][1000 genomes] |
| rs7956679 | 0.84[ASN][1000 genomes] |
| rs7966826 | 0.84[ASN][1000 genomes] |
| rs9705570 | 0.83[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000258121 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014