SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10875832	0.89[EUR][1000 genomes]
rs11168572	0.84[EUR][1000 genomes]
rs12318285	0.95[CHB][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.89[ASN][1000 genomes]
rs17123109	0.87[CHB][hapmap]
rs17123138	0.82[CHB][hapmap]
rs2705157	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2705165	0.91[EUR][1000 genomes]
rs2731074	1.00[CEU][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes]
rs2731075	0.92[EUR][1000 genomes]
rs56053566	0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
OR8S1	Proximal transcriptional regulation
ENSG00000198678	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
LALBA	SCAN
LMBR1L	SCAN