SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10783256	1.00[CEU][hapmap]
rs10875804	1.00[CEU][hapmap]
rs11168547	0.82[CEU][hapmap]
rs11168576	1.00[CEU][hapmap]
rs11168629	1.00[CEU][hapmap]
rs11168630	1.00[CEU][hapmap]
rs11168631	1.00[CEU][hapmap]
rs11168634	1.00[CEU][hapmap]
rs11168635	1.00[CEU][hapmap]
rs11168636	1.00[CEU][hapmap]
rs11168638	1.00[CEU][hapmap]
rs11168639	1.00[CEU][hapmap]
rs11168640	0.85[CEU][hapmap]
rs11830479	0.88[ASN][1000 genomes]
rs11836834	0.87[ASN][1000 genomes]
rs12230448	1.00[CEU][hapmap]
rs12230471	1.00[CEU][hapmap]
rs17237094	1.00[CEU][hapmap]
rs17237198	1.00[CEU][hapmap]
rs17834022	1.00[CEU][hapmap]
rs2468942	1.00[CEU][hapmap]
rs2705123	1.00[CEU][hapmap]
rs2705126	1.00[CEU][hapmap]
rs2705133	1.00[CEU][hapmap];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2705158	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2705162	0.86[EUR][1000 genomes]
rs2731069	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2731071	1.00[CEU][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2731073	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs2731101	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs60756250	0.86[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
OR8S1	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)