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rVarBase
SNP Report
Basic Infomation
Name
rs2705158  
dbSNP
Location
chr:12,48904875
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10783256
0.81[EUR][1000 genomes]
rs2705123
0.84[EUR][1000 genomes]
rs2705126
0.85[EUR][1000 genomes]
rs2705133
0.87[EUR][1000 genomes]
rs2705161
0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2705162
0.96[EUR][1000 genomes]
rs2731069
0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2731071
0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2731073
0.96[EUR][1000 genomes]
rs2731101
0.96[EUR][1000 genomes]
rs57022528
0.83[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
OR8S1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)