Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs246456  
dbSNP
Location
chr:5,96123088
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs151964
0.87[AMR][1000 genomes]
rs168674
0.81[AMR][1000 genomes]
rs246453
0.90[AMR][1000 genomes]
rs246454
0.90[AMR][1000 genomes]
rs246455
0.90[AMR][1000 genomes]
rs26510
0.88[AMR][1000 genomes]
rs27529
0.88[AMR][1000 genomes]
rs27710
0.88[AMR][1000 genomes]
rs30187
0.88[AMR][1000 genomes]
rs30378
0.90[AMR][1000 genomes]
rs30379
0.90[AMR][1000 genomes]
rs30380
0.90[AMR][1000 genomes]
rs469758
0.90[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ERAP1
Proximal transcriptional regulation
ERAP1
Distal transcriptional regulation
LNPEP
Distal transcriptional regulation
ENSG00000247121
Distal transcriptional regulation
ERAP1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)