SNP Report
Name | rs168674   dbSNP |
---|---|
Location | chr:5,96123125 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs151964 | 0.83[AMR][1000 genomes] |
rs246453 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs246454 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs246455 | 0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs246456 | 0.81[AMR][1000 genomes] |
rs26510 | 0.84[AMR][1000 genomes] |
rs27529 | 0.84[AMR][1000 genomes] |
rs27710 | 0.84[AMR][1000 genomes] |
rs30187 | 0.84[AMR][1000 genomes] |
rs30378 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs30379 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs30380 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs467735 | 0.80[ASN][1000 genomes] |
rs469367 | 0.82[ASN][1000 genomes] |
rs469758 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ERAP1 | Proximal transcriptional regulation |
ERAP1 | Distal transcriptional regulation |
LNPEP | Distal transcriptional regulation |
ENSG00000247121 | Distal transcriptional regulation |
ERAP1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014