SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2074223	0.82[ASN][1000 genomes]
rs2074224	0.82[ASN][1000 genomes]
rs2074228	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs2237997	0.89[CHB][hapmap];0.84[CHD][hapmap];0.82[ASN][1000 genomes]
rs2237998	0.93[ASN][1000 genomes]
rs2238000	0.82[EUR][1000 genomes]
rs4939483	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61899219	0.83[ASN][1000 genomes]
rs7929471	0.84[CHB][hapmap];0.91[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
CD6	Proximal transcriptional regulation
CD6	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)