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rVarBase
SNP Report
Basic Infomation
Name
rs61899219  
dbSNP
Location
chr:11,60770683
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2074223
0.85[ASN][1000 genomes]
rs2074224
0.85[ASN][1000 genomes]
rs2237996
0.83[ASN][1000 genomes]
rs2237997
0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2237999
0.85[ASN][1000 genomes]
rs3016163
0.85[ASN][1000 genomes]
rs4939483
0.83[ASN][1000 genomes]
rs7396422
0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
CD6
Proximal transcriptional regulation
CD6
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)