SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11168350	0.88[CHB][hapmap]
rs11168353	0.89[CHB][hapmap]
rs11168354	0.89[CHB][hapmap]
rs12423250	0.87[CEU][hapmap];0.89[CHB][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1859443	0.88[CHB][hapmap];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs954326	0.89[CHB][hapmap];0.90[ASN][1000 genomes]
rs9651981	0.89[CHB][hapmap]
rs9669263	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9804751	0.89[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
COL2A1	Distal transcriptional regulation
COL2A1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)