SNP Report

Basic Infomation

Name	rs1792922 dbSNP
Location	chr:11,61923375
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897226	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs10897227	0.88[EUR][1000 genomes]
rs10897228	0.88[EUR][1000 genomes]
rs10897229	0.88[EUR][1000 genomes]
rs11230921	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11230950	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11230970	0.88[EUR][1000 genomes]
rs12223548	0.88[EUR][1000 genomes]
rs1540185	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1614060	0.94[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1628349	0.89[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs1629983	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1675122	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1675123	0.89[CHB][hapmap]
rs1675124	0.83[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs1675125	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1675126	0.94[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1675127	0.89[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1792877	0.84[ASN][1000 genomes]
rs1792886	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1792888	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1792920	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2264278	0.83[CHB][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs2611759	0.87[ASN][1000 genomes]
rs2903921	0.91[ASN][1000 genomes]
rs3758970	0.88[ASN][1000 genomes]
rs3758971	0.88[ASN][1000 genomes]
rs3781971	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3915609	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs414975	0.92[ASN][1000 genomes]
rs4601791	0.87[EUR][1000 genomes]
rs7119240	0.88[EUR][1000 genomes]
rs72643562	0.94[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
INCENP	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)