SNP Report

Basic Infomation

Name	rs17825013 dbSNP
Location	chr:12,48702825
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 43)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1004746	1.00[CEU][hapmap];0.87[AMR][1000 genomes]
rs1004806	0.87[AMR][1000 genomes]
rs10506276	0.85[CEU][hapmap]
rs10506277	1.00[CEU][hapmap];0.87[AMR][1000 genomes]
rs10506278	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11830378	0.85[CEU][hapmap]
rs11834109	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs17122918	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs17122920	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs17224674	1.00[CEU][hapmap];0.87[AMR][1000 genomes]
rs17224828	0.85[CEU][hapmap]
rs17225198	0.85[CEU][hapmap]
rs17225261	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17225751	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17226359	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17226506	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17226723	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17823193	0.85[CEU][hapmap]
rs17823415	0.85[CEU][hapmap]
rs17823565	0.85[CEU][hapmap]
rs17824705	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17824989	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55684363	0.91[EUR][1000 genomes]
rs55763362	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs55854069	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55920439	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56084718	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56110736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56116946	0.87[AMR][1000 genomes]
rs56205628	0.87[AMR][1000 genomes]
rs56378318	0.91[EUR][1000 genomes]
rs56378908	0.87[AMR][1000 genomes]
rs56383074	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56412095	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs59724592	0.91[EUR][1000 genomes]
rs7297558	0.85[CEU][hapmap]
rs7301153	0.87[CEU][hapmap]
rs7301509	0.87[CEU][hapmap]
rs7307874	0.87[CEU][hapmap]
rs7310935	0.87[CEU][hapmap]
rs751315	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs751316	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7966782	0.98[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZNF641	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)