SNP Report

Basic Infomation

Name	rs17756585 dbSNP
Location	chr:14,69088909
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10873215	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs11158754	0.81[ASN][1000 genomes]
rs11158755	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs11158756	0.81[ASN][1000 genomes]
rs11629204	0.81[ASN][1000 genomes]
rs12436964	0.86[JPT][hapmap]
rs12893578	0.86[JPT][hapmap]
rs17106005	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17106008	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17106011	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17106012	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17756627	0.93[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2180611	0.86[JPT][hapmap]
rs2273485	0.93[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4643253	0.86[JPT][hapmap]
rs4899249	1.00[JPT][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4899250	1.00[JPT][hapmap]
rs4902615	0.81[CHB][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4902619	0.93[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902620	0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4902621	1.00[JPT][hapmap];0.85[YRI][hapmap];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs55990521	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61987113	0.81[ASN][1000 genomes]
rs68065132	0.84[ASN][1000 genomes]
rs7140554	1.00[JPT][hapmap];0.85[YRI][hapmap];0.81[ASN][1000 genomes]
rs7152224	0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7152382	0.88[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7152522	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs7153037	1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7153168	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7154244	1.00[JPT][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72729553	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72729557	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000259038	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)