SNP Report
Basic Infomation
| Name | rs7152382 dbSNP |
|---|---|
| Location | chr:14,69098681 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 24)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10873215 | 0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs11158754 | 0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs11158755 | 0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs11158756 | 0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs11629204 | 0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs17756585 | 0.88[AFR][1000 genomes];0.85[ASN][1000 genomes] |
| rs17756627 | 0.88[AFR][1000 genomes];0.85[ASN][1000 genomes] |
| rs2273485 | 0.88[AFR][1000 genomes];0.88[ASN][1000 genomes] |
| rs4643253 | 0.80[ASN][1000 genomes] |
| rs4899249 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4899250 | 0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs4902619 | 0.88[AFR][1000 genomes];0.85[ASN][1000 genomes] |
| rs4902620 | 0.88[AFR][1000 genomes];0.86[ASN][1000 genomes] |
| rs4902621 | 0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55767067 | 0.84[ASN][1000 genomes] |
| rs61987113 | 0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs61987118 | 0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs68065132 | 0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs7140554 | 0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs7152224 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7152522 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7153037 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[ASN][1000 genomes] |
| rs7154244 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72729557 | 0.88[AFR][1000 genomes];0.84[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000259038 | Proximal transcriptional regulation |
| ZFP36L1 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014