SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 14)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10040809	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.90[MEX][hapmap];0.91[MKK][hapmap];0.95[TSI][hapmap];0.83[YRI][hapmap];0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10074490	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10900804	0.82[EUR][1000 genomes]
rs2069614	0.81[CEU][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];0.80[MEX][hapmap];0.83[TSI][hapmap]
rs2069616	0.85[CEU][hapmap]
rs2069803	0.84[EUR][1000 genomes]
rs27437	0.87[GIH][hapmap]
rs3091338	0.85[CEU][hapmap];0.90[GIH][hapmap];0.80[MEX][hapmap];0.83[TSI][hapmap];0.81[EUR][1000 genomes]
rs3864277	0.81[CEU][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.81[MEX][hapmap];0.86[TSI][hapmap]
rs4705908	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4705915	0.88[CEU][hapmap]
rs6596047	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs721121	0.80[CEU][hapmap]
rs7714191	0.89[CEU][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.90[MEX][hapmap];0.93[TSI][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ACSL6	Proximal transcriptional regulation
ENSG00000223548	Proximal transcriptional regulation
ACSL6	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 6)