SNP Report

Basic Infomation

Name	rs171167 dbSNP
Location	chr:1,155681595
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 36)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10908468	0.84[EUR][1000 genomes]
rs1094462	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11803678	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12077729	0.84[EUR][1000 genomes]
rs1624846	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16837037	0.90[EUR][1000 genomes]
rs17377506	0.84[EUR][1000 genomes]
rs1962247	0.95[EUR][1000 genomes]
rs2477541	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2686255	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs348206	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41264969	0.95[EUR][1000 genomes]
rs4253908	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4933	0.95[EUR][1000 genomes]
rs4971086	0.92[EUR][1000 genomes]
rs4971087	0.92[EUR][1000 genomes]
rs543854	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs548809	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs552778	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs59706606	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs59791187	0.90[EUR][1000 genomes]
rs61258690	0.95[EUR][1000 genomes]
rs621181	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs682020	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs708612	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73001021	0.90[EUR][1000 genomes]
rs7525057	1.00[EUR][1000 genomes]
rs7535158	1.00[EUR][1000 genomes]
rs822018	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs822019	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs822020	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs822022	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs822026	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs822523	0.82[AMR][1000 genomes]
rs9426929	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9427223	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000227673	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)