SNP Report
Name | rs1388599   dbSNP |
---|---|
Location | chr:12,40640160 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10506152 | 1.00[CHB][hapmap] |
rs11175766 | 0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs11175780 | 0.85[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes] |
rs11564129 | 0.85[CEU][hapmap];0.84[AMR][1000 genomes] |
rs11564133 | 1.00[YRI][hapmap] |
rs11564149 | 0.85[CEU][hapmap];1.00[CHB][hapmap] |
rs11564150 | 0.85[CEU][hapmap];1.00[CHB][hapmap];0.80[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs11564180 | 0.85[CEU][hapmap];1.00[CHB][hapmap] |
rs1491937 | 1.00[YRI][hapmap] |
rs17444089 | 0.85[CEU][hapmap];1.00[CHB][hapmap] |
rs17466080 | 1.00[CHB][hapmap] |
rs17466178 | 1.00[CHB][hapmap];0.84[ASN][1000 genomes] |
rs17466185 | 0.84[ASN][1000 genomes] |
rs17466486 | 1.00[CHB][hapmap] |
rs17466626 | 1.00[CHB][hapmap] |
rs17483628 | 1.00[YRI][hapmap] |
rs17519881 | 0.85[CEU][hapmap] |
rs2046928 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2404574 | 1.00[YRI][hapmap] |
rs2404834 | 1.00[CHB][hapmap] |
rs4423250 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap] |
rs7136434 | 1.00[YRI][hapmap] |
rs7971935 | 0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.84[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
LRRK2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014