SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10878035	0.85[CEU][hapmap]
rs11175023	0.87[CEU][hapmap]
rs11564198	0.87[CEU][hapmap]
rs12308185	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1491943	1.00[JPT][hapmap];0.80[AMR][1000 genomes]
rs17442511	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs28365192	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs28365207	0.87[JPT][hapmap];0.80[AMR][1000 genomes]
rs4291738	1.00[JPT][hapmap];0.80[AMR][1000 genomes]
rs931207	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9652020	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000223914	Proximal transcriptional regulation
LRRK2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)