SNP Report

Basic Infomation

Name	rs13021038 dbSNP
Location	chr:2,65637879
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 55)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13013163	1.00[AFR][1000 genomes]
rs13023210	0.83[AFR][1000 genomes]
rs13026856	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs13029865	0.83[AFR][1000 genomes]
rs13032509	1.00[AFR][1000 genomes]
rs17475676	0.83[AFR][1000 genomes]
rs17534153	0.81[EUR][1000 genomes]
rs17534885	0.83[AFR][1000 genomes]
rs17535123	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17535158	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17535617	1.00[AFR][1000 genomes]
rs34004859	0.83[AMR][1000 genomes]
rs34073446	0.83[AFR][1000 genomes]
rs34191258	1.00[AFR][1000 genomes]
rs34276619	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34288960	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34422198	0.83[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs34479540	1.00[AFR][1000 genomes]
rs34561152	0.83[AFR][1000 genomes]
rs34635563	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs34665164	0.81[EUR][1000 genomes]
rs34720345	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs34826897	0.83[AFR][1000 genomes]
rs34875083	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs34892599	1.00[AFR][1000 genomes]
rs35153344	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35162271	0.83[AFR][1000 genomes]
rs35165760	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35205301	0.83[AFR][1000 genomes]
rs35312858	0.83[AFR][1000 genomes]
rs35339087	1.00[AFR][1000 genomes]
rs35476092	1.00[AFR][1000 genomes]
rs35490361	1.00[AFR][1000 genomes]
rs35493230	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35520113	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35528432	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35824125	1.00[AFR][1000 genomes]
rs35837416	0.83[AFR][1000 genomes]
rs35839181	0.83[AFR][1000 genomes]
rs35910768	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35974161	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs36044647	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs36088876	0.83[AFR][1000 genomes]
rs36103180	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs36188795	0.83[AFR][1000 genomes]
rs62141062	0.83[AFR][1000 genomes]
rs62141068	0.83[AFR][1000 genomes]
rs62141070	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62141074	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62141109	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62141110	0.87[AMR][1000 genomes]
rs62141120	1.00[AFR][1000 genomes]
rs62141139	1.00[AFR][1000 genomes]
rs71424182	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs71424185	1.00[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SPRED2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)