SNP Report
Basic Infomation
| Name | rs35910768 dbSNP |
|---|---|
| Location | chr:2,65639153 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 22)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs13021038 | 0.95[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs13026856 | 0.82[AMR][1000 genomes] |
| rs17535123 | 0.95[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs17535158 | 0.82[AMR][1000 genomes] |
| rs34276619 | 0.82[AMR][1000 genomes] |
| rs34288960 | 0.82[AMR][1000 genomes] |
| rs34635563 | 0.82[AMR][1000 genomes] |
| rs34720345 | 0.82[AMR][1000 genomes] |
| rs34875083 | 0.82[AMR][1000 genomes] |
| rs35153344 | 0.82[AMR][1000 genomes] |
| rs35165760 | 0.95[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs35493230 | 0.82[AMR][1000 genomes] |
| rs35520113 | 0.82[AMR][1000 genomes] |
| rs35528432 | 0.82[AMR][1000 genomes] |
| rs35974161 | 0.82[AMR][1000 genomes] |
| rs36044647 | 0.82[AMR][1000 genomes] |
| rs36103180 | 0.82[AMR][1000 genomes] |
| rs62141070 | 0.95[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs62141074 | 0.82[AMR][1000 genomes] |
| rs62141109 | 0.82[AMR][1000 genomes] |
| rs62141110 | 0.82[AMR][1000 genomes] |
| rs71424182 | 0.82[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SPRED2 | Distal transcriptional regulation |
| SPRED2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014