SNP Report

Basic Infomation

Name	rs12926067 dbSNP
Location	chr:16,23927248
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 48)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1005878	0.87[ASN][1000 genomes]
rs10221006	0.97[ASN][1000 genomes]
rs10459766	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10775269	0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11074587	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11641926	0.97[ASN][1000 genomes]
rs12446563	0.94[ASN][1000 genomes]
rs12927751	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12932420	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12933794	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13338431	0.97[ASN][1000 genomes]
rs1465195	0.93[ASN][1000 genomes]
rs169029	0.86[EUR][1000 genomes]
rs1858869	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1858870	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1858871	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1858872	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs195986	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs195987	0.83[EUR][1000 genomes]
rs195990	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs195991	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs195995	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs195996	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs195997	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs195999	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs196001	0.85[EUR][1000 genomes]
rs2188356	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28435782	1.00[ASN][1000 genomes]
rs3785392	0.92[ASN][1000 genomes]
rs3785394	0.99[ASN][1000 genomes]
rs56213545	0.94[ASN][1000 genomes]
rs56350292	0.91[ASN][1000 genomes]
rs60055466	0.97[ASN][1000 genomes]
rs60561757	0.93[ASN][1000 genomes]
rs6497700	0.93[ASN][1000 genomes]
rs6497703	0.96[ASN][1000 genomes]
rs66923906	0.92[ASN][1000 genomes]
rs67922443	0.97[ASN][1000 genomes]
rs7404320	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8051390	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8051531	0.93[ASN][1000 genomes]
rs8051574	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8051700	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8054675	0.97[ASN][1000 genomes]
rs8055773	0.93[ASN][1000 genomes]
rs8057516	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9924831	0.95[ASN][1000 genomes]
rs9940744	0.92[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PRKCB	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)