SNP Report

Basic Infomation

Name	rs12831063 dbSNP
Location	chr:12,48599198
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1074175	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10783235	0.93[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10783248	0.82[ASN][1000 genomes]
rs10875797	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs10875798	0.89[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs11168454	0.81[AFR][1000 genomes]
rs11168458	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11168513	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11168515	0.90[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11168532	0.86[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs11168535	0.86[AMR][1000 genomes]
rs11168541	1.00[JPT][hapmap]
rs12822431	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1387261	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1906717	0.86[JPT][hapmap]
rs2171643	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2261608	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2291483	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2634685	0.86[JPT][hapmap]
rs2732458	0.86[JPT][hapmap]
rs28379955	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34157519	0.86[AMR][1000 genomes]
rs35267282	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs3752820	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7301176	0.86[JPT][hapmap]
rs7974811	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
OR10AD1	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)