SNP Report

Basic Infomation

Name	rs12788265 dbSNP
Location	chr:11,62199766
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 42)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11822408	1.00[CHB][hapmap]
rs11823982	1.00[CHB][hapmap]
rs12287823	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs12796413	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12798826	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12802396	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2246920	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs2302362	0.82[EUR][1000 genomes]
rs2302363	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2513749	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs34037877	1.00[AMR][1000 genomes]
rs34143441	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs34685253	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs34707686	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34775496	1.00[AMR][1000 genomes]
rs34881912	1.00[AMR][1000 genomes]
rs35214315	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs35271183	0.87[ASN][1000 genomes]
rs35739405	0.87[ASN][1000 genomes]
rs35961711	1.00[AMR][1000 genomes]
rs3889277	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs41428648	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4340061	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs61893607	0.85[AMR][1000 genomes]
rs61893610	1.00[AMR][1000 genomes]
rs61893614	1.00[AMR][1000 genomes]
rs61893616	1.00[AMR][1000 genomes]
rs61893634	1.00[AMR][1000 genomes]
rs61893635	1.00[AMR][1000 genomes]
rs61893637	1.00[AMR][1000 genomes]
rs61893639	1.00[AMR][1000 genomes]
rs61893643	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs61893649	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61893651	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61893655	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7113294	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs7127368	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes]
rs71490371	1.00[AMR][1000 genomes]
rs71490372	1.00[AMR][1000 genomes]
rs71490374	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs71490375	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs71490377	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000255446	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)