SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1112255	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12526927	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs12660707	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12662218	0.92[JPT][hapmap]
rs1548145	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs16884310	1.00[CEU][hapmap];0.80[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16884399	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs16884468	1.00[YRI][hapmap]
rs16884481	1.00[YRI][hapmap]
rs4144650	1.00[CEU][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4599624	1.00[YRI][hapmap]
rs56655188	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7765765	0.86[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)