SNP Report

Basic Infomation

Name	rs12370643 dbSNP
Location	chr:12,48042460
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10783212	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10875682	0.92[ASN][1000 genomes]
rs10875685	0.89[CHB][hapmap];0.83[JPT][hapmap]
rs10875687	0.94[CHB][hapmap];0.84[JPT][hapmap]
rs11168191	0.94[ASN][1000 genomes]
rs11168192	1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[ASN][1000 genomes]
rs11168199	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11168200	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11168203	0.92[ASN][1000 genomes]
rs11168208	0.94[CHB][hapmap];0.85[JPT][hapmap];0.83[ASN][1000 genomes]
rs11168215	0.94[CHB][hapmap];0.83[JPT][hapmap]
rs1233059	0.83[AFR][1000 genomes]
rs12366410	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs2240079	0.94[CHB][hapmap];0.83[JPT][hapmap]
rs2240080	0.94[CHB][hapmap];0.83[JPT][hapmap]
rs2283346	0.94[CHB][hapmap];0.89[JPT][hapmap];0.87[ASN][1000 genomes]
rs3764013	0.94[CHB][hapmap];0.82[ASN][1000 genomes]
rs56240307	0.98[ASN][1000 genomes]
rs61917595	0.93[ASN][1000 genomes]
rs6580634	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7136561	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs7311663	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7484827	0.94[CHB][hapmap];0.83[JPT][hapmap]
rs7969186	0.89[CEU][hapmap];0.89[CHB][hapmap];0.90[JPT][hapmap];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7976748	0.94[CHB][hapmap];0.85[JPT][hapmap];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RPAP3	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)