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rVarBase
SNP Report
Basic Infomation
Name
rs1194337  
dbSNP
Location
chr:11,65259471
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11545200
0.82[EUR][1000 genomes]
rs11600543
0.94[EUR][1000 genomes]
rs11602375
0.94[EUR][1000 genomes]
rs11604369
0.98[EUR][1000 genomes]
rs11605810
0.90[EUR][1000 genomes]
rs11605937
0.82[EUR][1000 genomes]
rs12799784
0.84[EUR][1000 genomes]
rs34789990
0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35138901
0.98[EUR][1000 genomes]
rs36085849
0.81[EUR][1000 genomes]
rs3782089
0.82[EUR][1000 genomes]
rs71462347
0.90[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
C1orf123
Distal transcriptional regulation
ENSG00000259818
Distal transcriptional regulation
NEAT1
Distal transcriptional regulation
MIR612
Distal transcriptional regulation
MAP3K11
Distal transcriptional regulation
LTBP3
Distal transcriptional regulation
ENSG00000223247
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)